Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Nphp4P59240 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nphp4P59240 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nphp4P59240 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.23■□□□□ 0.83
Nphp4P59240 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.23■□□□□ 0.83
Nphp4P59240 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.23■□□□□ 0.83
Nphp4P59240 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.23■□□□□ 0.83
Nphp4P59240 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nphp4P59240 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.23■□□□□ 0.83
Nphp4P59240 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Nphp4P59240 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp4P59240 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC20.22■□□□□ 0.83
Nphp4P59240 Gm15653-201ENSMUST00000119247 907 ntBASIC20.22■□□□□ 0.83
Nphp4P59240 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Nphp4P59240 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Gm2423-201ENSMUST00000074863 733 ntBASIC20.22■□□□□ 0.83
Nphp4P59240 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Nphp4P59240 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp4P59240 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nphp4P59240 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.21■□□□□ 0.83
Nphp4P59240 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC20.21■□□□□ 0.83
Nphp4P59240 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC20.21■□□□□ 0.83
Nphp4P59240 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nphp4P59240 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nphp4P59240 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nphp4P59240 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp4P59240 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Nphp4P59240 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.2■□□□□ 0.82
Nphp4P59240 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nphp4P59240 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nphp4P59240 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp4P59240 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Nphp4P59240 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.19■□□□□ 0.82
Nphp4P59240 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Gm5866-201ENSMUST00000177881 973 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Gm24694-201ENSMUST00000180054 110 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Gm27663-201ENSMUST00000184839 110 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.19■□□□□ 0.82
Nphp4P59240 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.19■□□□□ 0.82
Nphp4P59240 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.19■□□□□ 0.82
Nphp4P59240 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Nphp4P59240 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nphp4P59240 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.19■□□□□ 0.82
Nphp4P59240 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC20.19■□□□□ 0.82
Nphp4P59240 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC20.19■□□□□ 0.82
Nphp4P59240 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.19■□□□□ 0.82
Nphp4P59240 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms