Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sssca1P56873 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Mir3081-201ENSMUST00000175305 84 ntBASIC12.18□□□□□ -0.46
Sssca1P56873 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.18□□□□□ -0.46
Sssca1P56873 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.18□□□□□ -0.46
Sssca1P56873 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sssca1P56873 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.18□□□□□ -0.46
Sssca1P56873 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.18□□□□□ -0.46
Sssca1P56873 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sssca1P56873 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sssca1P56873 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.17□□□□□ -0.46
Sssca1P56873 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm8344-201ENSMUST00000119813 856 ntBASIC12.17□□□□□ -0.46
Sssca1P56873 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sssca1P56873 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.17□□□□□ -0.46
Sssca1P56873 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.17□□□□□ -0.46
Sssca1P56873 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sssca1P56873 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sssca1P56873 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sssca1P56873 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sssca1P56873 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Sssca1P56873 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sssca1P56873 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Gm10252-201ENSMUST00000209541 832 ntBASIC12.16□□□□□ -0.46
Sssca1P56873 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.16□□□□□ -0.46
Sssca1P56873 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sssca1P56873 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sssca1P56873 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sssca1P56873 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms