Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox3P53784 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 BC037039-201ENSMUST00000192003 2205 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
Sox3P53784 Gm25948-201ENSMUST00000175334 112 ntBASIC14.41□□□□□ -0.1
Sox3P53784 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Gm8825-201ENSMUST00000182565 998 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox3P53784 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox3P53784 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox3P53784 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.41□□□□□ -0.1
Sox3P53784 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox3P53784 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox3P53784 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox3P53784 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox3P53784 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.4□□□□□ -0.1
Sox3P53784 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox3P53784 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox3P53784 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox3P53784 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.39□□□□□ -0.11
Sox3P53784 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox3P53784 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.39□□□□□ -0.11
Sox3P53784 Gm12428-201ENSMUST00000119844 727 ntBASIC14.39□□□□□ -0.11
Sox3P53784 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 Mir6977-201ENSMUST00000184960 64 ntBASIC14.39□□□□□ -0.11
Sox3P53784 Gm37153-201ENSMUST00000193637 231 ntBASIC14.39□□□□□ -0.11
Sox3P53784 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.39□□□□□ -0.11
Sox3P53784 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox3P53784 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox3P53784 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sox3P53784 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms