Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Gm12644-201ENSMUST00000119935 606 ntBASIC14.55□□□□□ -0.08
Tnfsf4P43488 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfsf4P43488 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.54□□□□□ -0.08
Tnfsf4P43488 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.54□□□□□ -0.08
Tnfsf4P43488 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf4P43488 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.53□□□□□ -0.08
Tnfsf4P43488 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf4P43488 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Tnfsf4P43488 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.52□□□□□ -0.08
Tnfsf4P43488 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf4P43488 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms