Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sdc2P43407 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sdc2P43407 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Sdc2P43407 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.89■□□□□ 0.29
Sdc2P43407 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.89■□□□□ 0.29
Sdc2P43407 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdc2P43407 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Sdc2P43407 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sdc2P43407 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.88■□□□□ 0.29
Sdc2P43407 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.88■□□□□ 0.29
Sdc2P43407 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.88■□□□□ 0.29
Sdc2P43407 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.88■□□□□ 0.29
Sdc2P43407 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Sdc2P43407 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sdc2P43407 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdc2P43407 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.87■□□□□ 0.29
Sdc2P43407 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sdc2P43407 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.87■□□□□ 0.29
Sdc2P43407 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Sdc2P43407 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdc2P43407 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sdc2P43407 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sdc2P43407 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sdc2P43407 Gm13418-201ENSMUST00000119097 944 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.86■□□□□ 0.29
Sdc2P43407 Gm28033-201ENSMUST00000184224 96 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44357-201ENSMUST00000195897 142 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm19658-201ENSMUST00000196231 138 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44367-201ENSMUST00000196836 138 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44350-201ENSMUST00000197197 138 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44390-201ENSMUST00000197533 144 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44313-201ENSMUST00000198018 138 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44486-201ENSMUST00000198508 138 ntBASIC16.86■□□□□ 0.29
Sdc2P43407 Gm44314-201ENSMUST00000199263 138 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms