Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hist1h1aP43275 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hist1h1aP43275 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.45□□□□□ -0.42
Hist1h1aP43275 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hist1h1aP43275 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.45□□□□□ -0.42
Hist1h1aP43275 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Mir7071-201ENSMUST00000184847 69 ntBASIC12.44□□□□□ -0.42
Hist1h1aP43275 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hist1h1aP43275 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm27742-201ENSMUST00000184667 60 ntBASIC12.43□□□□□ -0.42
Hist1h1aP43275 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.43□□□□□ -0.42
Hist1h1aP43275 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hist1h1aP43275 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.42□□□□□ -0.42
Hist1h1aP43275 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.42□□□□□ -0.42
Hist1h1aP43275 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms