Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.23□□□□□ -0.13
Cdx2P43241 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.23□□□□□ -0.13
Cdx2P43241 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdx2P43241 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdx2P43241 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdx2P43241 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Gm5566-201ENSMUST00000116118 459 ntBASIC14.22□□□□□ -0.13
Cdx2P43241 Gm14127-201ENSMUST00000117906 678 ntBASIC14.22□□□□□ -0.13
Cdx2P43241 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdx2P43241 Gm9794-201ENSMUST00000202370 423 ntBASIC14.22□□□□□ -0.13
Cdx2P43241 Shd-206ENSMUST00000225145 998 ntBASIC14.22□□□□□ -0.13
Cdx2P43241 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdx2P43241 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.22□□□□□ -0.13
Cdx2P43241 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdx2P43241 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx2P43241 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Cdx2P43241 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cdx2P43241 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdx2P43241 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.21□□□□□ -0.13
Cdx2P43241 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdx2P43241 Gm15321-201ENSMUST00000121290 288 ntBASIC14.21□□□□□ -0.13
Cdx2P43241 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdx2P43241 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdx2P43241 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx2P43241 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx2P43241 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx2P43241 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx2P43241 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx2P43241 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx2P43241 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdx2P43241 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdx2P43241 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cdx2P43241 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdx2P43241 Gm6218-201ENSMUST00000219812 628 ntBASIC14.2□□□□□ -0.14
Cdx2P43241 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cdx2P43241 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdx2P43241 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.2□□□□□ -0.14
Cdx2P43241 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdx2P43241 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdx2P43241 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.2□□□□□ -0.14
Cdx2P43241 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx2P43241 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdx2P43241 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms