Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.53□□□□□ -0.4
Abca1P41233 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.53□□□□□ -0.4
Abca1P41233 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.53□□□□□ -0.4
Abca1P41233 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abca1P41233 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.53□□□□□ -0.4
Abca1P41233 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.53□□□□□ -0.4
Abca1P41233 Gm22175-201ENSMUST00000175007 78 ntBASIC12.53□□□□□ -0.4
Abca1P41233 Gm19164-201ENSMUST00000210667 640 ntBASIC12.53□□□□□ -0.4
Abca1P41233 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Abca1P41233 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.52□□□□□ -0.4
Abca1P41233 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Abca1P41233 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.52□□□□□ -0.4
Abca1P41233 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abca1P41233 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Gm25948-201ENSMUST00000175334 112 ntBASIC12.52□□□□□ -0.41
Abca1P41233 Gm43767-201ENSMUST00000198933 381 ntBASIC12.52□□□□□ -0.41
Abca1P41233 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Abca1P41233 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Abca1P41233 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.52□□□□□ -0.41
Abca1P41233 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abca1P41233 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.52□□□□□ -0.41
Abca1P41233 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Gm7774-201ENSMUST00000200064 533 ntBASIC12.51□□□□□ -0.41
Abca1P41233 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Abca1P41233 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.51□□□□□ -0.41
Abca1P41233 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.51□□□□□ -0.41
Abca1P41233 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.51□□□□□ -0.41
Abca1P41233 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abca1P41233 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.51□□□□□ -0.41
Abca1P41233 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Abca1P41233 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms