Protein–RNA interactions for Protein: P40694

Ighmbp2, DNA-binding protein SMUBP-2, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighmbp2P40694 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.11■□□□□ 0.17
Ighmbp2P40694 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.11■□□□□ 0.17
Ighmbp2P40694 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.11■□□□□ 0.17
Ighmbp2P40694 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.11■□□□□ 0.17
Ighmbp2P40694 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighmbp2P40694 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Gm37935-201ENSMUST00000192012 982 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Rps4l-201ENSMUST00000071745 943 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.1■□□□□ 0.17
Ighmbp2P40694 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighmbp2P40694 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighmbp2P40694 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighmbp2P40694 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.08■□□□□ 0.17
Ighmbp2P40694 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ighmbp2P40694 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ighmbp2P40694 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms