Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm13836-201ENSMUST00000121159 501 ntBASIC16.45■□□□□ 0.22
Sox5P35710 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.45■□□□□ 0.22
Sox5P35710 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.45■□□□□ 0.22
Sox5P35710 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.45■□□□□ 0.22
Sox5P35710 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Sox5P35710 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox5P35710 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.44■□□□□ 0.22
Sox5P35710 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sox5P35710 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sox5P35710 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sox5P35710 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Mir7071-201ENSMUST00000184847 69 ntBASIC16.44■□□□□ 0.22
Sox5P35710 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Sox5P35710 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sox5P35710 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox5P35710 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Sox5P35710 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox5P35710 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Gm6296-201ENSMUST00000222599 943 ntBASIC16.43■□□□□ 0.22
Sox5P35710 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.43■□□□□ 0.22
Sox5P35710 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox5P35710 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox5P35710 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.42■□□□□ 0.22
Sox5P35710 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sox5P35710 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.42■□□□□ 0.22
Sox5P35710 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox5P35710 Gm12008-201ENSMUST00000117791 755 ntBASIC16.42■□□□□ 0.22
Sox5P35710 Gm12644-201ENSMUST00000119935 606 ntBASIC16.42■□□□□ 0.22
Sox5P35710 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Gm33142-201ENSMUST00000193913 867 ntBASIC16.42■□□□□ 0.22
Sox5P35710 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.42■□□□□ 0.22
Sox5P35710 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.42■□□□□ 0.22
Sox5P35710 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Sox5P35710 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox5P35710 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.42■□□□□ 0.22
Sox5P35710 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox5P35710 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox5P35710 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms