Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.38□□□□□ -0.75
Smim1P0C8K7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gm18671-201ENSMUST00000214826 683 ntBASIC10.38□□□□□ -0.75
Smim1P0C8K7 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gm7791-201ENSMUST00000219066 539 ntBASIC10.38□□□□□ -0.75
Smim1P0C8K7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smim1P0C8K7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.37□□□□□ -0.75
Smim1P0C8K7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm38027-201ENSMUST00000192315 235 ntBASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.37□□□□□ -0.75
Smim1P0C8K7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smim1P0C8K7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms