Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LtaP09225 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
LtaP09225 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LtaP09225 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.3□□□□□ -0.44
LtaP09225 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LtaP09225 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LtaP09225 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LtaP09225 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LtaP09225 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.29□□□□□ -0.44
LtaP09225 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.29□□□□□ -0.44
LtaP09225 Gm12008-201ENSMUST00000117791 755 ntBASIC12.29□□□□□ -0.44
LtaP09225 Gm11594-201ENSMUST00000122313 162 ntBASIC12.29□□□□□ -0.44
LtaP09225 Gm17271-201ENSMUST00000165535 355 ntBASIC12.29□□□□□ -0.44
LtaP09225 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
LtaP09225 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.29□□□□□ -0.44
LtaP09225 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.29□□□□□ -0.44
LtaP09225 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LtaP09225 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LtaP09225 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LtaP09225 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LtaP09225 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.28□□□□□ -0.44
LtaP09225 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LtaP09225 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LtaP09225 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LtaP09225 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LtaP09225 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LtaP09225 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LtaP09225 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LtaP09225 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Gm13597-201ENSMUST00000121239 375 ntBASIC12.27□□□□□ -0.45
LtaP09225 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.27□□□□□ -0.45
LtaP09225 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.27□□□□□ -0.45
LtaP09225 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LtaP09225 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LtaP09225 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms