Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tuba1bP05213 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tuba1bP05213 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gm13312-201ENSMUST00000119631 718 ntBASIC14.01□□□□□ -0.17
Tuba1bP05213 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Gm27867-201ENSMUST00000184778 125 ntBASIC14.01□□□□□ -0.17
Tuba1bP05213 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.01□□□□□ -0.17
Tuba1bP05213 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Tuba1bP05213 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tuba1bP05213 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tuba1bP05213 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tuba1bP05213 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tuba1bP05213 Gm7935-201ENSMUST00000100555 1278 ntBASIC14□□□□□ -0.17
Tuba1bP05213 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tuba1bP05213 Gm12895-201ENSMUST00000122214 226 ntBASIC14□□□□□ -0.17
Tuba1bP05213 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tuba1bP05213 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14□□□□□ -0.17
Tuba1bP05213 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14□□□□□ -0.17
Tuba1bP05213 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Tuba1bP05213 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Gm45003-201ENSMUST00000205875 2158 ntBASIC14□□□□□ -0.17
Tuba1bP05213 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tuba1bP05213 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tuba1bP05213 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tuba1bP05213 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Tuba1bP05213 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Tuba1bP05213 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tuba1bP05213 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.99□□□□□ -0.17
Tuba1bP05213 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.99□□□□□ -0.17
Tuba1bP05213 Gm17971-201ENSMUST00000190239 806 ntBASIC13.99□□□□□ -0.17
Tuba1bP05213 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Tuba1bP05213 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tuba1bP05213 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms