Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Gm7729-201ENSMUST00000050143 801 ntBASIC13.25□□□□□ -0.29
P04224 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
P04224 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.25□□□□□ -0.29
P04224 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P04224 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P04224 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.24□□□□□ -0.29
P04224 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.24□□□□□ -0.29
P04224 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P04224 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.24□□□□□ -0.29
P04224 Gm37722-201ENSMUST00000193757 208 ntBASIC13.24□□□□□ -0.29
P04224 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P04224 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P04224 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
P04224 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.24□□□□□ -0.29
P04224 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P04224 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P04224 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.24□□□□□ -0.29
P04224 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P04224 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P04224 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
P04224 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
P04224 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
P04224 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P04224 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.22□□□□□ -0.29
P04224 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
P04224 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
P04224 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P04224 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.22□□□□□ -0.29
P04224 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
P04224 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.22□□□□□ -0.29
P04224 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P04224 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04224 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04224 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04224 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms