Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt1P04104 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.25□□□□□ -0.13
Krt1P04104 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.25□□□□□ -0.13
Krt1P04104 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.25□□□□□ -0.13
Krt1P04104 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.25□□□□□ -0.13
Krt1P04104 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Krt1P04104 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Gm10566-201ENSMUST00000086739 996 ntBASIC14.25□□□□□ -0.13
Krt1P04104 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Krt1P04104 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt1P04104 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.24□□□□□ -0.13
Krt1P04104 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Krt1P04104 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.24□□□□□ -0.13
Krt1P04104 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.24□□□□□ -0.13
Krt1P04104 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.24□□□□□ -0.13
Krt1P04104 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Krt1P04104 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Krt1P04104 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt1P04104 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Krt1P04104 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Krt1P04104 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Gm12527-201ENSMUST00000117967 564 ntBASIC14.23□□□□□ -0.13
Krt1P04104 Gm15039-201ENSMUST00000118914 875 ntBASIC14.23□□□□□ -0.13
Krt1P04104 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.23□□□□□ -0.13
Krt1P04104 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Krt1P04104 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt1P04104 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt1P04104 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms