Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col4a1P02463 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.27■□□□□ 0.52
Col4a1P02463 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col4a1P02463 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col4a1P02463 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col4a1P02463 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col4a1P02463 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.27■□□□□ 0.51
Col4a1P02463 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.27■□□□□ 0.51
Col4a1P02463 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Gm15653-201ENSMUST00000119247 907 ntBASIC18.26■□□□□ 0.51
Col4a1P02463 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Gm23984-201ENSMUST00000157139 203 ntBASIC18.26■□□□□ 0.51
Col4a1P02463 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Col4a1P02463 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Mir125a-201ENSMUST00000083545 68 ntBASIC18.26■□□□□ 0.51
Col4a1P02463 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.26■□□□□ 0.51
Col4a1P02463 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col4a1P02463 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col4a1P02463 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col4a1P02463 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a1P02463 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Col4a1P02463 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Col4a1P02463 Gm9726-201ENSMUST00000180321 678 ntBASIC18.25■□□□□ 0.51
Col4a1P02463 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a1P02463 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.25■□□□□ 0.51
Col4a1P02463 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a1P02463 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col4a1P02463 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 BC001981-202ENSMUST00000191393 1545 ntBASIC18.25■□□□□ 0.51
Col4a1P02463 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.25■□□□□ 0.51
Col4a1P02463 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.25■□□□□ 0.51
Col4a1P02463 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.25■□□□□ 0.51
Col4a1P02463 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a1P02463 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Col4a1P02463 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Col4a1P02463 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.24■□□□□ 0.51
Col4a1P02463 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.24■□□□□ 0.51
Col4a1P02463 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a1P02463 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.24■□□□□ 0.51
Col4a1P02463 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.24■□□□□ 0.51
Col4a1P02463 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms