Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
TcraP01849 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
TcraP01849 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
TcraP01849 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.01□□□□□ -0.65
TcraP01849 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
TcraP01849 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.01□□□□□ -0.65
TcraP01849 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.01□□□□□ -0.65
TcraP01849 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
TcraP01849 Gm7213-201ENSMUST00000215977 950 ntBASIC11.01□□□□□ -0.65
TcraP01849 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
TcraP01849 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.01□□□□□ -0.65
TcraP01849 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
TcraP01849 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
TcraP01849 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.01□□□□□ -0.65
TcraP01849 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
TcraP01849 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TcraP01849 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TcraP01849 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Gm21451-201ENSMUST00000111062 2775 ntBASIC11□□□□□ -0.65
TcraP01849 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
TcraP01849 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
TcraP01849 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
TcraP01849 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11□□□□□ -0.65
TcraP01849 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11□□□□□ -0.65
TcraP01849 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11□□□□□ -0.65
TcraP01849 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
TcraP01849 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11□□□□□ -0.65
TcraP01849 Gm13436-201ENSMUST00000120418 567 ntBASIC11□□□□□ -0.65
TcraP01849 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11□□□□□ -0.65
TcraP01849 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11□□□□□ -0.65
TcraP01849 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11□□□□□ -0.65
TcraP01849 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11□□□□□ -0.65
TcraP01849 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TcraP01849 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11□□□□□ -0.65
TcraP01849 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Gm6858-201ENSMUST00000208582 1468 ntBASIC11□□□□□ -0.65
TcraP01849 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TcraP01849 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TcraP01849 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.99□□□□□ -0.65
TcraP01849 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms