Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm27646-201ENSMUST00000183989 110 ntBASIC14.22□□□□□ -0.13
Matn4O89029 Gm27704-201ENSMUST00000185094 107 ntBASIC14.22□□□□□ -0.13
Matn4O89029 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.22□□□□□ -0.13
Matn4O89029 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Matn4O89029 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.22□□□□□ -0.13
Matn4O89029 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.22□□□□□ -0.13
Matn4O89029 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn4O89029 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Matn4O89029 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Matn4O89029 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Matn4O89029 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Matn4O89029 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Matn4O89029 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.21□□□□□ -0.13
Matn4O89029 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Matn4O89029 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn4O89029 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Matn4O89029 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Matn4O89029 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Matn4O89029 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Matn4O89029 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Matn4O89029 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn4O89029 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Matn4O89029 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Matn4O89029 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.2□□□□□ -0.14
Matn4O89029 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.2□□□□□ -0.14
Matn4O89029 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Matn4O89029 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Matn4O89029 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Matn4O89029 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn4O89029 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
Matn4O89029 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.19□□□□□ -0.14
Matn4O89029 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Gm6296-201ENSMUST00000222599 943 ntBASIC14.19□□□□□ -0.14
Matn4O89029 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn4O89029 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn4O89029 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn4O89029 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn4O89029 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Matn4O89029 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
Matn4O89029 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.19□□□□□ -0.14
Matn4O89029 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms