Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.44■□□□□ 0.06
Syn1O88935 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.43■□□□□ 0.06
Syn1O88935 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Syn1O88935 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Gm42612-201ENSMUST00000197986 623 ntBASIC15.43■□□□□ 0.06
Syn1O88935 Gm43170-201ENSMUST00000199827 612 ntBASIC15.43■□□□□ 0.06
Syn1O88935 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.43■□□□□ 0.06
Syn1O88935 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Syn1O88935 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.43■□□□□ 0.06
Syn1O88935 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Syn1O88935 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Syn1O88935 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Gm27920-201ENSMUST00000183953 96 ntBASIC15.42■□□□□ 0.06
Syn1O88935 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.42■□□□□ 0.06
Syn1O88935 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Syn1O88935 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syn1O88935 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Syn1O88935 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Syn1O88935 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.41■□□□□ 0.06
Syn1O88935 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Syn1O88935 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Gm24543-201ENSMUST00000103867 82 ntBASIC15.41■□□□□ 0.06
Syn1O88935 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.41■□□□□ 0.06
Syn1O88935 Gm37917-201ENSMUST00000194711 392 ntBASIC15.41■□□□□ 0.06
Syn1O88935 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.41■□□□□ 0.06
Syn1O88935 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Syn1O88935 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Syn1O88935 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Syn1O88935 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Syn1O88935 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syn1O88935 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.4■□□□□ 0.06
Syn1O88935 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms