Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.49□□□□□ -0.25
Hdac3O88895 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hdac3O88895 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hdac3O88895 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Gm27459-201ENSMUST00000184860 107 ntBASIC13.49□□□□□ -0.25
Hdac3O88895 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.49□□□□□ -0.25
Hdac3O88895 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.49□□□□□ -0.25
Hdac3O88895 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hdac3O88895 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hdac3O88895 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Hdac3O88895 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hdac3O88895 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hdac3O88895 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hdac3O88895 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hdac3O88895 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hdac3O88895 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.48□□□□□ -0.25
Hdac3O88895 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm15358-201ENSMUST00000119249 520 ntBASIC13.48□□□□□ -0.25
Hdac3O88895 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.48□□□□□ -0.25
Hdac3O88895 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hdac3O88895 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm34391-201ENSMUST00000203706 907 ntBASIC13.48□□□□□ -0.25
Hdac3O88895 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.48□□□□□ -0.25
Hdac3O88895 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hdac3O88895 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.48□□□□□ -0.25
Hdac3O88895 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.48□□□□□ -0.25
Hdac3O88895 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.48□□□□□ -0.25
Hdac3O88895 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdac3O88895 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm43347-201ENSMUST00000200226 580 ntBASIC13.47□□□□□ -0.25
Hdac3O88895 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.47□□□□□ -0.25
Hdac3O88895 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.47□□□□□ -0.25
Hdac3O88895 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.47□□□□□ -0.25
Hdac3O88895 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms