Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp2O88623 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp2O88623 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.3■□□□□ 0.04
Usp2O88623 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp2O88623 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp2O88623 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.3■□□□□ 0.04
Usp2O88623 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp2O88623 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp2O88623 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp2O88623 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp2O88623 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp2O88623 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp2O88623 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp2O88623 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp2O88623 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp2O88623 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp2O88623 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.29■□□□□ 0.04
Usp2O88623 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Gm15483-201ENSMUST00000120338 456 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Auts2-212ENSMUST00000178555 309 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Mir6990-201ENSMUST00000183724 91 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Usp2O88623 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.29■□□□□ 0.04
Usp2O88623 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Gm8396-201ENSMUST00000057361 823 ntBASIC15.29■□□□□ 0.04
Usp2O88623 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp2O88623 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp2O88623 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Usp2O88623 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp2O88623 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Usp2O88623 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.28■□□□□ 0.04
Usp2O88623 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Usp2O88623 Gm6973-201ENSMUST00000117080 721 ntBASIC15.28■□□□□ 0.04
Usp2O88623 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.28■□□□□ 0.04
Usp2O88623 Gm43474-201ENSMUST00000196415 774 ntBASIC15.28■□□□□ 0.04
Usp2O88623 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.28■□□□□ 0.04
Usp2O88623 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Usp2O88623 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Usp2O88623 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Usp2O88623 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp2O88623 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp2O88623 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms