Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.06□□□□□ -0.16
Tulp3O88413 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tulp3O88413 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tulp3O88413 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.06□□□□□ -0.16
Tulp3O88413 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Celf4-206ENSMUST00000224553 1729 ntBASIC14.05□□□□□ -0.16
Tulp3O88413 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Gm18622-201ENSMUST00000219361 595 ntBASIC14.05□□□□□ -0.16
Tulp3O88413 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tulp3O88413 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tulp3O88413 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tulp3O88413 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tulp3O88413 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.04□□□□□ -0.16
Tulp3O88413 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.04□□□□□ -0.16
Tulp3O88413 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tulp3O88413 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
Tulp3O88413 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Tulp3O88413 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tulp3O88413 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Tulp3O88413 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tulp3O88413 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Tulp3O88413 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tulp3O88413 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Grk6-207ENSMUST00000225925 2769 ntBASIC14.03□□□□□ -0.16
Tulp3O88413 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tulp3O88413 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.03□□□□□ -0.16
Tulp3O88413 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Gm25016-201ENSMUST00000158399 131 ntBASIC14.03□□□□□ -0.16
Tulp3O88413 Gm29518-201ENSMUST00000190858 372 ntBASIC14.03□□□□□ -0.16
Tulp3O88413 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.03□□□□□ -0.16
Tulp3O88413 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.03□□□□□ -0.16
Tulp3O88413 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tulp3O88413 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.03□□□□□ -0.16
Tulp3O88413 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.03□□□□□ -0.16
Tulp3O88413 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tulp3O88413 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms