Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ttc3O88196 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ttc3O88196 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Gm13464-201ENSMUST00000119418 935 ntBASIC15.67■□□□□ 0.1
Ttc3O88196 Gm9824-201ENSMUST00000178707 561 ntBASIC15.67■□□□□ 0.1
Ttc3O88196 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.67■□□□□ 0.1
Ttc3O88196 Gm7730-201ENSMUST00000212486 454 ntBASIC15.67■□□□□ 0.1
Ttc3O88196 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
Ttc3O88196 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.67■□□□□ 0.1
Ttc3O88196 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ttc3O88196 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ttc3O88196 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.67■□□□□ 0.1
Ttc3O88196 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.67■□□□□ 0.1
Ttc3O88196 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.67■□□□□ 0.1
Ttc3O88196 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.67■□□□□ 0.1
Ttc3O88196 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ttc3O88196 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ttc3O88196 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm18766-201ENSMUST00000189811 808 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ttc3O88196 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ttc3O88196 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm27533-201ENSMUST00000183800 152 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ttc3O88196 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Gm2423-201ENSMUST00000074863 733 ntBASIC15.66■□□□□ 0.1
Ttc3O88196 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ttc3O88196 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms