Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pde6dO55057 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pde6dO55057 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.89□□□□□ -0.51
Pde6dO55057 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pde6dO55057 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.88□□□□□ -0.51
Pde6dO55057 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pde6dO55057 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pde6dO55057 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Pde6dO55057 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Gm7370-201ENSMUST00000219471 767 ntBASIC11.88□□□□□ -0.51
Pde6dO55057 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pde6dO55057 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Pde6dO55057 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.88□□□□□ -0.51
Pde6dO55057 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pde6dO55057 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pde6dO55057 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.87□□□□□ -0.51
Pde6dO55057 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pde6dO55057 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pde6dO55057 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.87□□□□□ -0.51
Pde6dO55057 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.87□□□□□ -0.51
Pde6dO55057 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pde6dO55057 Gm10602-201ENSMUST00000098239 609 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pde6dO55057 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.87□□□□□ -0.51
Pde6dO55057 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.87□□□□□ -0.51
Pde6dO55057 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pde6dO55057 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pde6dO55057 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms