Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm11424-201ENSMUST00000121929 829 ntBASIC16.54■□□□□ 0.24
Prom1O54990 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Mir8102-201ENSMUST00000184148 139 ntBASIC16.54■□□□□ 0.24
Prom1O54990 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.54■□□□□ 0.24
Prom1O54990 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.54■□□□□ 0.24
Prom1O54990 Gm9063-201ENSMUST00000223299 582 ntBASIC16.54■□□□□ 0.24
Prom1O54990 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Prom1O54990 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.53■□□□□ 0.24
Prom1O54990 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prom1O54990 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prom1O54990 Gm13823-201ENSMUST00000119930 345 ntBASIC16.53■□□□□ 0.24
Prom1O54990 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Prom1O54990 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.53■□□□□ 0.24
Prom1O54990 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.53■□□□□ 0.24
Prom1O54990 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prom1O54990 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Prom1O54990 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Prom1O54990 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prom1O54990 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prom1O54990 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.52■□□□□ 0.24
Prom1O54990 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prom1O54990 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prom1O54990 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.52■□□□□ 0.24
Prom1O54990 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.52■□□□□ 0.24
Prom1O54990 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Prom1O54990 Gm27533-201ENSMUST00000183800 152 ntBASIC16.52■□□□□ 0.24
Prom1O54990 Gm43767-201ENSMUST00000198933 381 ntBASIC16.52■□□□□ 0.24
Prom1O54990 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prom1O54990 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prom1O54990 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Prom1O54990 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Prom1O54990 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prom1O54990 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Prom1O54990 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.52■□□□□ 0.23
Prom1O54990 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prom1O54990 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.51■□□□□ 0.23
Prom1O54990 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms