Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.03■□□□□ 0.16
Kcnu1O54982 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.03■□□□□ 0.16
Kcnu1O54982 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Kcnu1O54982 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kcnu1O54982 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Kcnu1O54982 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Kcnu1O54982 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.02■□□□□ 0.16
Kcnu1O54982 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.02■□□□□ 0.16
Kcnu1O54982 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.02■□□□□ 0.16
Kcnu1O54982 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Kcnu1O54982 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Gm13884-201ENSMUST00000118103 829 ntBASIC16.02■□□□□ 0.16
Kcnu1O54982 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.02■□□□□ 0.16
Kcnu1O54982 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Gm5864-201ENSMUST00000202263 970 ntBASIC16.02■□□□□ 0.16
Kcnu1O54982 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kcnu1O54982 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kcnu1O54982 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Kcnu1O54982 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Kcnu1O54982 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.01■□□□□ 0.15
Kcnu1O54982 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.01■□□□□ 0.15
Kcnu1O54982 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.01■□□□□ 0.15
Kcnu1O54982 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kcnu1O54982 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Kcnu1O54982 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16■□□□□ 0.15
Kcnu1O54982 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Gm37297-201ENSMUST00000192974 2384 ntBASIC16■□□□□ 0.15
Kcnu1O54982 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Kcnu1O54982 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Kcnu1O54982 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16■□□□□ 0.15
Kcnu1O54982 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16■□□□□ 0.15
Kcnu1O54982 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Kcnu1O54982 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Gm10060-201ENSMUST00000212002 111 ntBASIC16■□□□□ 0.15
Kcnu1O54982 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16■□□□□ 0.15
Kcnu1O54982 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16■□□□□ 0.15
Kcnu1O54982 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Kcnu1O54982 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Kcnu1O54982 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Kcnu1O54982 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.99■□□□□ 0.15
Kcnu1O54982 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms