Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Efnb3O35393 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Efnb3O35393 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Efnb3O35393 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Efnb3O35393 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Efnb3O35393 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.91□□□□□ -0.5
Efnb3O35393 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.91□□□□□ -0.5
Efnb3O35393 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.91□□□□□ -0.5
Efnb3O35393 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Efnb3O35393 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.91□□□□□ -0.5
Efnb3O35393 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.91□□□□□ -0.5
Efnb3O35393 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Efnb3O35393 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Efnb3O35393 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Efnb3O35393 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.91□□□□□ -0.5
Efnb3O35393 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.91□□□□□ -0.5
Efnb3O35393 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Efnb3O35393 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Efnb3O35393 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Efnb3O35393 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Efnb3O35393 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Efnb3O35393 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Efnb3O35393 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.9□□□□□ -0.5
Efnb3O35393 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.9□□□□□ -0.5
Efnb3O35393 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Efnb3O35393 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Efnb3O35393 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.9□□□□□ -0.51
Efnb3O35393 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Efnb3O35393 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Efnb3O35393 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Efnb3O35393 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Efnb3O35393 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.89□□□□□ -0.51
Efnb3O35393 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Efnb3O35393 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.89□□□□□ -0.51
Efnb3O35393 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.89□□□□□ -0.51
Efnb3O35393 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms