Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.12■□□□□ 0.65
Col15a1O35206 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col15a1O35206 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.12■□□□□ 0.65
Col15a1O35206 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.12■□□□□ 0.65
Col15a1O35206 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Olfr286-202ENSMUST00000205305 969 ntBASIC19.12■□□□□ 0.65
Col15a1O35206 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.12■□□□□ 0.65
Col15a1O35206 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.12■□□□□ 0.65
Col15a1O35206 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.11■□□□□ 0.65
Col15a1O35206 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Col15a1O35206 Gm21854-201ENSMUST00000179901 471 ntBASIC19.11■□□□□ 0.65
Col15a1O35206 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.11■□□□□ 0.65
Col15a1O35206 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col15a1O35206 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col15a1O35206 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col15a1O35206 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.11■□□□□ 0.65
Col15a1O35206 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Col15a1O35206 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col15a1O35206 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col15a1O35206 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.1■□□□□ 0.65
Col15a1O35206 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.1■□□□□ 0.65
Col15a1O35206 Gm28631-201ENSMUST00000190740 334 ntBASIC19.1■□□□□ 0.65
Col15a1O35206 Gm18187-201ENSMUST00000196476 984 ntBASIC19.1■□□□□ 0.65
Col15a1O35206 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Col15a1O35206 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.1■□□□□ 0.65
Col15a1O35206 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col15a1O35206 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col15a1O35206 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.09■□□□□ 0.65
Col15a1O35206 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col15a1O35206 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.09■□□□□ 0.65
Col15a1O35206 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Col15a1O35206 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Gm45668-201ENSMUST00000211271 493 ntBASIC19.09■□□□□ 0.65
Col15a1O35206 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.09■□□□□ 0.65
Col15a1O35206 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col15a1O35206 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col15a1O35206 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Col15a1O35206 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Col15a1O35206 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.08■□□□□ 0.65
Col15a1O35206 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.08■□□□□ 0.65
Col15a1O35206 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Col15a1O35206 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.08■□□□□ 0.65
Col15a1O35206 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms