Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm27742-201ENSMUST00000184667 60 ntBASIC15.48■□□□□ 0.07
Trove2O08848 Gm33142-201ENSMUST00000193913 867 ntBASIC15.48■□□□□ 0.07
Trove2O08848 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trove2O08848 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.48■□□□□ 0.07
Trove2O08848 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.48■□□□□ 0.07
Trove2O08848 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trove2O08848 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trove2O08848 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.47■□□□□ 0.07
Trove2O08848 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trove2O08848 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trove2O08848 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Gm27704-201ENSMUST00000185094 107 ntBASIC15.47■□□□□ 0.07
Trove2O08848 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.47■□□□□ 0.07
Trove2O08848 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trove2O08848 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trove2O08848 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.47■□□□□ 0.07
Trove2O08848 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.47■□□□□ 0.07
Trove2O08848 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trove2O08848 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Gm13312-201ENSMUST00000119631 718 ntBASIC15.46■□□□□ 0.07
Trove2O08848 Gm7284-201ENSMUST00000131667 944 ntBASIC15.46■□□□□ 0.07
Trove2O08848 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trove2O08848 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trove2O08848 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.46■□□□□ 0.07
Trove2O08848 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Trove2O08848 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trove2O08848 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trove2O08848 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trove2O08848 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trove2O08848 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.46■□□□□ 0.06
Trove2O08848 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trove2O08848 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trove2O08848 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trove2O08848 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trove2O08848 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.45■□□□□ 0.06
Trove2O08848 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trove2O08848 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.45■□□□□ 0.06
Trove2O08848 Gm14859-201ENSMUST00000117752 357 ntBASIC15.45■□□□□ 0.06
Trove2O08848 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trove2O08848 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.45■□□□□ 0.06
Trove2O08848 Mir6404-201ENSMUST00000183699 94 ntBASIC15.45■□□□□ 0.06
Trove2O08848 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.45■□□□□ 0.06
Trove2O08848 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trove2O08848 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trove2O08848 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trove2O08848 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms