Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm27300-201ENSMUST00000184085 97 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm27335-201ENSMUST00000184758 97 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gm18733-201ENSMUST00000173950 856 ntBASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-3J3QMG8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-3J3QMG8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav13d-3J3QMG8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms