Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc7bE9Q9Y3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Rps4l-201ENSMUST00000071745 943 ntBASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc7bE9Q9Y3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm18195-201ENSMUST00000207604 706 ntBASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc7bE9Q9Y3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms