Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc85cE9Q6B2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Gm38241-201ENSMUST00000192641 898 ntBASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Gm45453-201ENSMUST00000211758 853 ntBASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc85cE9Q6B2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc85cE9Q6B2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Ccdc85cE9Q6B2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc85cE9Q6B2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.39■□□□□ 0.54
Ccdc85cE9Q6B2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Gm3786-201ENSMUST00000202659 378 ntBASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc85cE9Q6B2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Mir7654-201ENSMUST00000185082 70 ntBASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc85cE9Q6B2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Gm37466-201ENSMUST00000195692 652 ntBASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc85cE9Q6B2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms