Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm12260-201ENSMUST00000122447 411 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm27525-201ENSMUST00000184465 107 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm6443-201ENSMUST00000203599 874 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpsf4lE9Q2N0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Efs-202ENSMUST00000227037 2540 ntBASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4lE9Q2N0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms