Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm1335-201ENSMUST00000121653 386 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm8597-201ENSMUST00000191525 1109 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gm25951-201ENSMUST00000175330 64 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Arhgef33-210ENSMUST00000225548 456 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 AC156501.1-201ENSMUST00000228219 270 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Rn7s6-201ENSMUST00000175005 291 ntBASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm21769-201ENSMUST00000211922 111 ntBASIC8.25□□□□□ -1.09
Herc1E9PZP8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm25668-201ENSMUST00000157700 129 ntBASIC8.25□□□□□ -1.09
Herc1E9PZP8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Gm25545-201ENSMUST00000122673 323 ntBASIC8.25□□□□□ -1.09
Herc1E9PZP8 Mir6927-201ENSMUST00000184494 71 ntBASIC8.25□□□□□ -1.09
Herc1E9PZP8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Herc1E9PZP8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC8.24□□□□□ -1.09
Herc1E9PZP8 AC125486.1-201ENSMUST00000218701 320 ntBASIC8.24□□□□□ -1.09
Herc1E9PZP8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Gm36858-201ENSMUST00000194501 2391 ntBASIC8.24□□□□□ -1.09
Herc1E9PZP8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Herc1E9PZP8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms