Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Gm10576-201ENSMUST00000191927 825 ntBASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm13365-201ENSMUST00000121188 973 ntBASIC14□□□□□ -0.17
Pcdh17E9PXF0 Auts2-212ENSMUST00000178555 309 ntBASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm20553-201ENSMUST00000204205 844 ntBASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14□□□□□ -0.17
Pcdh17E9PXF0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14□□□□□ -0.17
Pcdh17E9PXF0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh17E9PXF0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm16198-201ENSMUST00000118766 670 ntBASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm11745-201ENSMUST00000121669 448 ntBASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh17E9PXF0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms