Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Grk6-207ENSMUST00000225925 2769 ntBASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms