Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm6623-201ENSMUST00000173570 544 ntBASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav6d-5A0A075B6B9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm8318-201ENSMUST00000182954 872 ntBASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-5A0A075B6B9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-5A0A075B6B9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-5A0A075B6B9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-5A0A075B6B9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trav6d-5A0A075B6B9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-5A0A075B6B9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm9013-201ENSMUST00000132939 882 ntBASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm22240-201ENSMUST00000175225 82 ntBASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms