Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-1A0A075B699 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gm27357-201ENSMUST00000183754 135 ntBASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9d-1A0A075B699 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gm15372-201ENSMUST00000120729 834 ntBASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9d-1A0A075B699 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Gm17807-201ENSMUST00000186869 298 ntBASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms