Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.66□□□□□ -0.54
Trav16A0A075B653 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Gm37055-201ENSMUST00000191866 133 ntBASIC11.66□□□□□ -0.54
Trav16A0A075B653 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.66□□□□□ -0.54
Trav16A0A075B653 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.65□□□□□ -0.54
Trav16A0A075B653 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Gm22240-201ENSMUST00000175225 82 ntBASIC11.65□□□□□ -0.54
Trav16A0A075B653 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.65□□□□□ -0.54
Trav16A0A075B653 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16A0A075B653 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16A0A075B653 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16A0A075B653 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16A0A075B653 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16A0A075B653 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16A0A075B653 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16A0A075B653 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.64□□□□□ -0.55
Trav16A0A075B653 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.64□□□□□ -0.55
Trav16A0A075B653 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16A0A075B653 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms