Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Matn2-206ENSMUST00000228570 2798 ntBASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav8-1A0A075B641 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Gm10698-201ENSMUST00000182663 604 ntBASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Gm7791-201ENSMUST00000219066 539 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms