Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Mir770-201ENSMUST00000103252 94 ntBASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16nA0A075B634 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16nA0A075B634 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16nA0A075B634 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16nA0A075B634 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm8825-201ENSMUST00000182565 998 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm4518-201ENSMUST00000182638 718 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16nA0A075B634 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16nA0A075B634 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms