Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm12896-201ENSMUST00000118430 226 ntBASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Mir6404-201ENSMUST00000183699 94 ntBASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Gm42642-201ENSMUST00000200683 355 ntBASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav4n-4A0A075B615 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm14722-201ENSMUST00000118943 689 ntBASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Mir5133-201ENSMUST00000174955 77 ntBASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms