Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm43767-201ENSMUST00000198933 381 ntBASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ighv1-55A0A075B5W6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms