Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb3S4R1G7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb3S4R1G7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb3S4R1G7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb3S4R1G7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm15358-201ENSMUST00000119249 520 ntBASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm12644-201ENSMUST00000119935 606 ntBASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb3S4R1G7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Gm8097-201ENSMUST00000117903 829 ntBASIC13.57□□□□□ -0.24
H2afb3S4R1G7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.57□□□□□ -0.24
H2afb3S4R1G7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.56□□□□□ -0.24
H2afb3S4R1G7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms