Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm27430-201ENSMUST00000184585 107 ntBASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm44333-201ENSMUST00000197168 107 ntBASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h3Q9Z0Y9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Mir449b-201ENSMUST00000104833 80 ntBASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h3Q9Z0Y9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h3Q9Z0Y9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Nr1h3Q9Z0Y9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24158-201ENSMUST00000175263 71 ntBASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm7774-201ENSMUST00000200064 533 ntBASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms