Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Gm7774-201ENSMUST00000200064 533 ntBASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Prob1-201ENSMUST00000097619 3021 ntBASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcb1Q9Z0H3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Auts2-212ENSMUST00000178555 309 ntBASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcb1Q9Z0H3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcb1Q9Z0H3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcb1Q9Z0H3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcb1Q9Z0H3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Smarcb1Q9Z0H3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcb1Q9Z0H3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Gm10576-201ENSMUST00000191927 825 ntBASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.58■□□□□ 0.08
Smarcb1Q9Z0H3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms