Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cr1Q9Z0D9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cr1Q9Z0D9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm18032-201ENSMUST00000222541 538 ntBASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cr1Q9Z0D9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cx3cr1Q9Z0D9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms