Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx9Q9WUH2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Auts2-212ENSMUST00000178555 309 ntBASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx9Q9WUH2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.29□□□□□ -0.12
Lhx9Q9WUH2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms