Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atp6ap1Q9R1Q9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.75□□□□□ -0.05
Atp6ap1Q9R1Q9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Atp6ap1Q9R1Q9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms