Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Gm15427-201ENSMUST00000117288 531 ntBASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Rpph1-201ENSMUST00000175096 319 ntBASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tubd1Q9R1K7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tubd1Q9R1K7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm43514-201ENSMUST00000198852 424 ntBASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tubd1Q9R1K7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubd1Q9R1K7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms